Genomics | Developmental Evolution | Bioinformatics | Evolutionary/Comparative Genetics | Evolutionary Ecology
The effect of the distribution of distances between trees on detection of phylogenetic recombination
Society for Molecular Biology and Evolution 2010 meeting, 4 - 8 Jul 2010, P-S09-07
This poster describes the software biomc2, which detects phylogenetic recombination using a prior distribution of distances between topologies of consecutive alignment segments.
We present its usage on an HIV genomic dataset and on simulated alignments, where we show the importance of our chosen probability for the distances, which resemble the minimum number of recombinations.
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